CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_210000024
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_210000024
T139320_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_210000024
C2H2 ZF
135
157
HKCKDCSYSTAYKSDLRRHMYKH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
163
185
FECKVCGYKAARQKEMVQHSRIH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
191
213
FKCDQCDFSTAQSSTLKAHKMRH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
224
246
FKCKECDYSTAHRADLRQHMFRH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
252
274
FVCKVCGYKVGKRNAMVIHSRIH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
280
302
FKCDQCDFSTTQRNSLKEHKMRH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
308
330
HMCDVCGLRFYTKPNLNAHMNRH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
341
364
HKCDKCKYATAHKTHLAIHVARYH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
370
392
HMCEYCGYRTVDRSNLATHKKTH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
398
420
FKCDLCDYSSVAKKKLQQHMSKH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
426
448
YMCTMCDFRTVYKPSLLSHMQRH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
454
476
FKCDLCDYRAAQKSSLKSHMVQH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
482
505
HICPDCGHKTAHRSNLLSHMRKIH
fgenesh2_pg.scaffold_210000024
C2H2 ZF
514
536
LKCDQCDYRTAKTSSLKSHMVKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found