CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_225000037
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_225000037
T139333_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_225000037
C2H2 ZF
263
284
YDCEDCGIVYRNMDNLNAHKMY
fgenesh2_pg.scaffold_225000037
C2H2 ZF
311
332
QCPVCHKTFSNAGLLQVHMLTH
fgenesh2_pg.scaffold_225000037
C2H2 ZF
523
545
YRCPLCQYVANSAASVNRHLKMH
fgenesh2_pg.scaffold_225000037
C2H2 ZF
587
608
TYCLDCSIKFTSINNYFVHKKY
fgenesh2_pg.scaffold_225000037
C2H2 ZF
1010
1032
FQCPYCQFSARTCSALMVHVKGH
fgenesh2_pg.scaffold_225000037
C2H2 ZF
1038
1061
FRCSLCPFTVADMSALMEHWKDQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found