CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_229000072
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_229000072
T139344_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_229000072
C2H2 ZF
15
37
YMCGECGYRAAQRSHLSQHMRIH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
43
66
YNCDQCDYSAAQKSNLEQHQLAKH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
72
94
YMCRECGYKTVYKSYLSHHLRSH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
108
130
YICGECGYKTVGKSHLSKHMRTH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
165
187
YMCGECEYKTASRYLLSQHTKVH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
221
243
YICGECGYRTAKRSNLSQHMRIH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
249
272
YKCDHCDYSAAQKSNLDHHQLAKH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
278
300
YMCWECGYNTANRYNLSHHMKSH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
306
329
YKCHQCDYSALYKSGLSYHLKTKH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
335
357
YMCGECGFRAAVKSSLSMHMKSH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
392
414
YMCEKCGYRTAQKSHLSEHMRSH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
420
442
YKCDQCDYSAAHKSTLQYHLTKH
fgenesh2_pg.scaffold_229000072
C2H2 ZF
448
470
YMCEKCGYRTAQRSNLSQHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found