CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_23000081
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_23000081
T139346_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_23000081
C2H2 ZF
134
156
LVCGECGYRTDHKGHFGRHVKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
162
184
FACEECEYRSNQKYALQRHMKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
191
213
ITCGMCGYKTSSRSLMVKHMRTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
219
241
HVCLECGYRARYKSGLAVHLKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
247
270
FVCVECDHRTGTKDALKKHVSRVH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
403
425
FMCGKCGFRTSISDELRKHMKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
458
480
FTCGICGFRTPFSGEMKKHEVTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
484
506
FICGECGYRAGHQARLDAHMRKH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
542
565
FVCKDCDYTAVSKYTLEKHVSKAH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
683
705
FKCDECSYRTSSKYTLEKRLKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
720
742
FMCEKCSYRTSLKSSLRKHLLIH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
746
768
FICGECGHREISRSKLEAHMRIH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
774
796
FSCAECGYKTAFRGNLEKHLKTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
802
824
YTCEECGYRTTMRSMMTRHARTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
831
852
DCEVCGYSAVDKNDLDRHLRIH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
858
880
FKCTECGYQAAQRSALTNHLRTH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
886
908
YACPECDYRAAQKSALRNHMEIH
fgenesh2_pg.scaffold_23000081
C2H2 ZF
914
936
FMCTECGFRAANKNTMVAHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found