CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_23000083
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_23000083
T139347_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_23000083
C2H2 ZF
39
61
HSCSLCEFSSTDRQQLESHMCTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
91
113
FMCGECGHRTDRKSAMDNHMKVH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
119
141
FACEKCEYRAGSKGDLKRHMKTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
147
169
YMCGECGHRTDRKSAMDNHMRVH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
175
202
FACEECDCGECSYRTPWKASLERHVQTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
253
274
TICKDCGYKTTNKTDMLAHKKT
fgenesh2_pg.scaffold_23000083
C2H2 ZF
277
299
LSCRECDFRAATKYDLDRHVKTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
302
324
YMCEKCGFLTPFHSTMNGHMKKH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
330
352
IKCELCDYRTVSQWRLKPHMLTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
358
380
FKCGKCDFKTARKEHLKRHTETH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
388
410
FHCEHCDYKAAERCKLERHMTTH
fgenesh2_pg.scaffold_23000083
C2H2 ZF
416
438
YACDKCDYRAAQRGTLKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found