CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_23000084
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_23000084
T139348_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_23000084
C2H2 ZF
41
63
YMCGECGHRTDRKSAMDNHMKVH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
69
91
FDCEDCDFSATHKGDLKRHMETH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
99
120
MCGECGFQTANGGAMTIHMKVH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
131
153
YACEECTYQTASKGDLQTHMKTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
192
208
EKITQQSYHLNTHMKTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
214
236
FMCGECGYRAATKSAMDKHVRIH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
242
264
YACRLCDYRATQKGSLGYHMRTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
270
297
FVCEECGYRAALKGNLDKHVMKSHRRTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
303
325
FACGQCDYMTAEKDSLDKHMKTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
331
354
FACEECGCRAALKGNLHKHVLTIH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
402
423
TICKDCGYKTTDKADMLAHKKT
fgenesh2_pg.scaffold_23000084
C2H2 ZF
429
451
HPCGQCDFRAATKFDLDRHVKTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
486
508
LKCEQCDFSAAWKNSLKAHMKTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
514
536
FKCGECGYKTARKYHLKRHTETH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
544
566
FHCGHCDYKAAKKDTLERHMTTH
fgenesh2_pg.scaffold_23000084
C2H2 ZF
572
594
YACDKCDYRAAQQATLKQHQETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found