CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_241000018
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_241000018
T139357_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_241000018
C2H2 ZF
17
39
LTCQFCEYKGVNSSRLEEHVRTH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
45
68
FQCQQCEYSARQKRVLEMHIRIKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
74
97
YRCKHCDFSAASSTVLTNHVRATH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
103
126
FQCALCDFSSIYKASLQHHIMAKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
132
154
HKCTECDFATVGKSILNRHMVNH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
160
182
YRCELCDHSTNTNHELKRHMATH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
188
211
HKCDFCDYSSTIKSSLKRHVLALH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
217
239
YKCDVCDYTAVSRYSLKQHAVKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
245
267
YKCDTCDYATAVKSSLTTHMKKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
273
295
YKCEICGYSATLLQYLKNHMTNH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
301
323
YKCELCEYAASTKKRLQEHMAKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
329
351
YKCELCDFRTTYRVNLKHHMVTH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
357
379
YKCDACDFSAAHMSRLKRHMAKH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
418
441
YKCDACDFSTERIERLERHILATH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
447
468
FKCEVCGYSTKAKINLKRHMAK
fgenesh2_pg.scaffold_241000018
C2H2 ZF
498
520
FKCEVCGYSTKAKTNLKRHMTTH
fgenesh2_pg.scaffold_241000018
C2H2 ZF
526
548
YRCDACGFSTALLDTLKRHMATH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found