CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_2512000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_2512000001
T139361_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
14
36
YMCGVCGYRAERKSNLSLHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
43
64
KCDQCDYSAARKSSLDKHLQMH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
70
92
YMCGDCGYRTAQKSDLSRHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
98
120
YHCDQCDYSAAQKPHLDRHLRKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
126
148
YMCGECGYRTTQRYDLSRHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
154
176
YKCDQCSYSAAQKCYLDKHLVKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
217
239
YKCDQCGYSAALKSYLDRHLRIH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
245
267
YKCGECGYRTAQRSALSRHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
273
295
YKCDQCDYSAAQKINLVQHTTKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
301
323
YICGECEYKATNKSHLSRHMKIH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
329
352
YNCDQCDYSAAHKSNLDRHIAAKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
358
380
YMCEVCGFRTAYRSELSRHVRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
386
408
YKCDQCDYSAAGKSALNQHLAKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
414
436
YLCEECGYSATRNSYLSQHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
442
464
YKCDHCDYSAADKSTLVKHIRKH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
470
492
YMCGECGFRTADRSTLSRHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
498
520
YKCDQCDYSAARKYDLDKHLATH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
526
548
FMCGECGHRTAEKSDLARHMRTH
fgenesh2_pg.scaffold_2512000001
C2H2 ZF
554
576
YKCDQCDFSAAEKSTLDRHLTKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found