CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_254000037
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_254000037
T139366_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_254000037
C2H2 ZF
89
111
YKCEQCDYCTASKGTLSMHMAKH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
117
139
YRCGECGFRTGHRSALSSHMKIH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
145
167
YKCDLCDYCTALKVQLEIHMAKH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
173
195
YMCGECGFRTGDKSALSTHMNIH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
226
248
YMCGKCGYRTAYSDDLSSHMKTH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
254
276
YKCDQCGYCTDKKWSLDKHVATH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
282
304
YTCGKCRYRTAYMDDLFSHMKMH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
310
332
YKCDQCGYYTDRKWSLDKHMAKH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
336
355
DQCGYCRASKGGLDRHMAKH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
390
412
YKCDQCDFCTARKGDLDTHIAEH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
418
440
YLCEKCGYRTADKILLSGHMKVH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
445
467
HQCDQCDYSTAFKSTLDIHKEKH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
473
495
YMCGECGFRTNYRHSLSGHMKIH
fgenesh2_pg.scaffold_254000037
C2H2 ZF
526
548
YMCWECGYRTGDRSALSMHMNIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found