CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_254000038
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_254000038
T139367_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_254000038
C2H2 ZF
106
129
FMCGECEYTTDNRSNLTKHIKMVH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
135
157
YKCDQCDFCTARKGDLDTHIAEH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
163
185
YLCEKCGYRTADKILLSGHMKVH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
190
212
HQCDQCDYSTAFKSTLDIHKEKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
218
240
YMCGECGFRTADKILLSGHMKVH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
245
267
HQCDQCDYSTAFKSTLDIHKEKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
273
295
YMCGECGFRTNYRHSLSGHMKIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
326
348
YMCGECGYRTGDRSALSMHMNIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
379
401
YMCGKCGYRTAYKDDLSSHMKTH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
407
429
YKCDQCNYCTAYKQALISHMAKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
435
457
YMCGECGFRTNYRSSLSSHLKMH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
481
503
YMCGECGYRTGDKSTLSKHMNIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
562
584
YKCDLCGYCTDRKWSLDEHMAKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
615
637
YKCDQCGYCTAFKSALDRHKVKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
643
665
YTCGECGFRTGDRSDLFGHMKMH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
671
693
FKCDQCDFCTAREAALIQHMAIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
699
721
YMCGECGFRTGFKSALSMHMNIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
746
768
YKCEECGYRTAYRDDLSSHMKTH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
774
796
YKCDLCDYCTADKQALKTHMAKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
802
824
YMCGECGFRTADRSDLSQHMKMH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
830
852
YKCDQCDYCTAFKSALDAHKVKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
879
901
YMCGECGYRTDLSSSLSKHMKKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
912
934
YMCGECGYRTAYRNTLSSHMKIH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
979
1001
DKCEKCGYRTADKIQLSSHLKTH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1036
1058
YICTECEYRTGYQSALSNHMKKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1064
1086
YKCEHCDYRTARQGYLDKHMAKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1092
1114
YKCDWCGYSTARKGYLAKHMAKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1120
1142
YKCYQCAFCTSRKSALIQHMVKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1148
1170
YICGECGFRTGFKPALSKHMKKH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1176
1198
YKCEHCDYRTARKGCLDKHMAEH
fgenesh2_pg.scaffold_254000038
C2H2 ZF
1204
1226
YKCDQCDFSTAKQGQLEKHIGKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found