CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_257000032
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_257000032
T139370_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_257000032
C2H2 ZF
16
38
YMCEECGYRASQKHHLSRHMRIH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
44
66
YRCDQCDYSAAVKHHLIDHQTTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
72
94
YMCGECGYRSAKRSTLTRHMRTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
100
121
YKCDHCDYSAADRVSLDQHVHT
fgenesh2_pg.scaffold_257000032
C2H2 ZF
133
155
YKCDQCNYSAAVKSALVQHLAKH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
161
183
YMCGECGYRTAKKSSLTQHKRIH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
189
211
YKCDQCDYSAAAKCALLNHQRKH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
217
239
YTCGECGYRAAQRQHLIRHMRTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
245
267
YKCDLCDYSAAEKHHLIDHQKRH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
273
295
YMCEKCGYRTVKKCNLYEHIRTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
301
323
YRCDQCDYSTGQKSTLGQHMKTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
332
355
FKCDQCEYAAAQKANLERHIAAKH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
361
383
YMCGECGYRTANRSHLSRHMKTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
389
411
YMCDQCDYSAAEKHNLIDHQTTH
fgenesh2_pg.scaffold_257000032
C2H2 ZF
417
439
YMCEKCGFRAAQRSTLSKHMRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found