CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_257000046
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_257000046
T139372_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_257000046
C2H2 ZF
84
105
YMCDVCGSRTARKCNLALHKRT
fgenesh2_pg.scaffold_257000046
C2H2 ZF
141
163
YMCEKCGYRTSCQAHLCRHIRTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
169
191
YKCDQCNYSAAQKSALNTHLKTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
197
219
FMCGECGHRTMTKLLLVQHMRTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
225
248
YGCDLCDYSAGVKASLERHIMVKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
254
276
YKCSECEFKTADSSHFYKHMKKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
288
311
HKCGECDYSTSQKCRLDQHIISKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
317
339
YRCDKCDLRTASKSRLSLHMRKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
343
364
YKCHQCGFCTARKYQFDRHIHT
fgenesh2_pg.scaffold_257000046
C2H2 ZF
372
394
YLCEECGYRTAKGSSLILHKRTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
400
422
FMCEECGYRATDRSHLSRHIRRH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
428
450
YKCDQCGFSASHKSALDHHLRTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
456
478
YICEECGHRTTTKPALLRHMRTH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
484
507
YDCDLCEYSAADKACLERHIMVKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
513
535
YMCGECGYRTADSSHFYKHIKKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
547
570
HKCDECDYSASQKCRLDQHIISKH
fgenesh2_pg.scaffold_257000046
C2H2 ZF
576
597
YRCDKCDFRTASKSHLSLHIKK
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found