CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_266000021
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_266000021
T139381_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_266000021
C2H2 ZF
104
126
YKCDLCGYCATHIWQLERHMAKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
134
156
YKCEECGLRTADESYLSKHMRTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
162
185
FQCDQCDYSATQKEDLDRHLALKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
191
213
FMCGECGHMAVGKPEFYRHMRTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
219
241
YKCDQCDYSAIYKSILDRHMVIH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
247
269
YMCGECGYRTADKSALTKHMRTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
275
298
FKCDQCDYSAIQKGQLDRHVLSRH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
304
326
YMCGECGYRTSDKSCLSKHMRKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
332
354
LMCGECGYRAADKSQLSRHKKTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
360
382
YNCDQCDYSTGLKDNFERHVAKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
388
410
YMCGECGYRTADRSSLTKHMRTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
416
438
YKCDQCDYAATQKGQLDRHMAKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
444
466
YTCSKCDYRTTDKSYLSRHMKTH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
471
493
YMCGECGYRAADKSELSTHMREH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
552
574
FMCGECGYSASDKSELSTHMREH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
580
602
YKCDQCNFSAVEKHYLDQHMAQH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
608
630
YMCGECGYRAADKSELSTHMREH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
689
711
FMCGECGYSASDKSELSTHMREH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
717
739
YKCDQCNFSAVEKHYLDQHMAQH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
745
767
YMCGECGYRAANMSEISTHLREH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
773
795
YKCDQCDYSAAQKRCLDRHMAKH
fgenesh2_pg.scaffold_266000021
C2H2 ZF
801
823
YMCNECGYRTDNSYNMSRHVKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found