CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_266000057
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_266000057
T139386_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_266000057
C2H2 ZF
57
79
YVCKDCGYRTDRKNSLTRHMRKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
85
107
YSCEECGFRTAYRCNLSQHMLKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
141
163
YVCGECGYRTAKISALSKHMGKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
169
191
FKCNQCDFSTAYKSCLNGHMRMH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
197
219
YMCGECGYRAAQRTSLVQHMAKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
225
247
YKCDQCDYSARYKRSLDHHKKKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
255
277
YKCGDCGYMASKMSELFRHVSLH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
283
305
YKCDQCDYTSSTKKDLDQHMVKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
313
335
YMCGECGFRTTDGSSLSKHRKIH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
341
363
FKCDQCKFTAVSKQSLDSHLLKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
367
389
FICGECGYRTAKKSRLSRHMRTH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
398
420
YKCDKCDYSTPWKKCLNLHARKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
429
451
FECDLCDFSTAYEIHLKQHKFTH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
457
479
YKCKQCDFSSAWRNSLEDHMLTH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
485
507
YMCGECGYRATTKRRLTEHMRSH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
513
535
YKCDQCDFSTARKNSLVSHILTH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
541
563
YSCEVCGYKASRKGHLVRHMAKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
569
591
YKCDFCDFSSARKDNLNQHMAKH
fgenesh2_pg.scaffold_266000057
C2H2 ZF
597
619
YKCDRCGYSTARKHNLIKHLNKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found