CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_268000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_268000003
T139389_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_268000003
C2H2 ZF
10
32
FMCGECGYRARHKYRLVEHMRKH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
38
60
FKCDQCNYNASYKTLLVKHMKSH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
69
83
DISHKSDLIKHRRRH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
89
110
YGCQECDYKARDKGTLLRHKDK
fgenesh2_pg.scaffold_268000003
C2H2 ZF
131
153
YVCDVCGFKTSTAHRLSQHRKRH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
159
181
FMCGECGFRACHKYRLVRHMRTH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
187
209
FKCNQCNYKTSHERYLVEHMKTH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
215
237
YRCEICDYQTYKKSHFEKHMMCH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
243
265
YKCEECDYRTAYNPDLTRHRRRH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
320
342
FMCGECDYRAYHNCRLVEHMRKH
fgenesh2_pg.scaffold_268000003
C2H2 ZF
348
370
FKCKECSYSTAYKGDLVKHLRYH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found