CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_27000065
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_27000065
T139391_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_27000065
C2H2 ZF
516
538
MCVDCNKTFRSHVDLKMHVLRNH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
570
593
IYCTECDSTFKMFMDLKMHVMQVH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
869
891
KCPACGACFKALSRLKQHVLLEH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
917
940
VSCSECGAGFATPIELKSHFLKHH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
976
999
HMCEECGVGFATQEAKMTHVQVEH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
1026
1049
HLCPQCGTGFSTEIERKRHVLEHH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
1704
1726
KCPACGACFKALSRLKQHVLLEH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
1752
1775
VSCSECGAGFATPIELKSHFLKQH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
1811
1834
HMCEECGVGFATQEAKMTHVQVEH
fgenesh2_pg.scaffold_27000065
C2H2 ZF
1861
1884
HLCPQCGTGFSTEIERKRHVLEHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found