CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_271000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_271000002
T139393_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_271000002
C2H2 ZF
218
240
YKCDQCDFSAAKKSLLDEHLARH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
246
268
FVCGECGFRTAWRSRLSIHKRKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
274
296
YKCDQCDYSAAEKGTLTIHRAKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
302
324
YICTECDYRTVRSDKLARHKRTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
330
352
YKCHLCDYSAAHKLSLDNHVAKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
358
380
FKCDHCDYSAVRKAHLNDHMTTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
386
408
FACGQCGYRLATKSSLSQHLKTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
414
436
FKCGLCNFSTVTEITLNKHVRQH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
442
464
YICRECGYSTSRRYMLSRHKRTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
470
492
YKCDQCDYSAARKHHLDIHLLTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
498
520
YTCDQCDYSAAHKLSLDNHLAKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
526
548
FACDQCDYTAVRKSHLNDHMKTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
552
574
FSCGDCGYRTALKSNLSQHLHIH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
580
602
FKCDQCDYLAARKAHLDSHLITH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
608
630
YTCDQCDYSAAHKLSLDNHLAKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
636
658
FNCDQCNYRAVRRSHLNDHLATH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
664
686
FVCGECGYNTAVKSNLFQHLKTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
692
714
HQCDHCDYSATRKSHLNRHLRKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
720
742
YMCRVCGLRTGDKSFLAQHMKTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
748
770
HKCDYCDYSALRKSGLDAHLARH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
776
798
YVCGECGYRTVESSSLSKHQRTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
805
827
YKCDQCDYSAMQKASLDTHLAKH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
833
855
FACEECGFRTAGKSNLSKHKKTH
fgenesh2_pg.scaffold_271000002
C2H2 ZF
861
883
YKCDQCDYSAVRKSHLDIHLAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found