CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_271000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_271000003
T139394_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_271000003
C2H2 ZF
95
117
YKCGDCGYSGAKKADLSRHLRVH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
123
145
YKCDQCDYTAAARSSLGIHLAKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
151
173
FTCGECEFKTHRRSNLARHVRTH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
179
201
YKCDQCDYSAARKFSLELHRAKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
207
229
FVCGVCGYKTANKSDLYRHERIH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
235
257
YKCDFCDYSAAVKSTLDIHVAKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
264
286
FECKECGYKTHIRSNLNRHMTMH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
292
314
YKCDQCDYSAAQKCSLDVHLAKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
320
342
FKCNQCEYSATKKSHLDSHLAKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
348
371
YMCGKCGYKTAQKSHLSLHMRIHH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
423
445
YKCGQCDYSASRKSYLNSHLVKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
451
473
YICRECGYAARHKSTLSRHMKTH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
479
501
YKCDQCDYSAKHKSSLDIHLGKH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
507
529
YICIECGFSTHGKPNLSQHMRTH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
535
557
YKCDLCDYSAARKSHLDSHLVRH
fgenesh2_pg.scaffold_271000003
C2H2 ZF
563
586
YLCGECGYRTAEKSHLSRHMRTHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found