CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_2842000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_2842000001
T139400_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
24
46
HKCNYCDKEFRFKSGLIGHLRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
52
74
YQCGECGKRFSHLSHLKGHMRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
80
102
YRCQECSMQFRGLSDLKVHVRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
108
130
YKCEHCNKCFSKSTNLKTHMQTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
136
158
YKCEECSKQFTTLSNLKKHIRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
164
186
YSCEECSKHFSDLSSLKRHMRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
192
214
YRCEECSKQFSTLSDLKRHMRTH
fgenesh2_pg.scaffold_2842000001
C2H2 ZF
220
242
YTCEACSKQFSDQGNLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found