CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_285000031
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_285000031
T139403_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_285000031
C2H2 ZF
26
48
HKCGECDKEFLRLSGLKVHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
54
76
FRCEECSKQFSVLSHLKRHTRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
82
104
FSCEECSKQFRVLSYLKNHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
110
132
YRCDECSKRFSELGSLKQHIKTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
138
160
YRCEECGRQFSQLGDLKSHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
166
188
FRCEECRKHFSKLFSLKRHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
194
216
YRCEECNKQFSQLGHLKQHMKTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
222
244
HRCEECGRQFLKLGDLKRHVRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
250
272
YKCEECGRQFSELGHLKSHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
278
300
YKCEECSKQFSELGSLKRHMRIH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
306
328
YRCEECGRQFSQLGDLKSHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
334
356
FRCEECRKHFSKLFSLKRHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
362
384
YRCEECNKQFSQLGHLKQHMKTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
390
412
HRCEECGRQFLKLGDLKRHVRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
418
440
YKCEECGRQFSELGHLKSHMRTH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
446
468
YKCEECSKQFSELGSLKRHMRIH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
474
496
YKCEECSKQFSDLSNLKRHMRAH
fgenesh2_pg.scaffold_285000031
C2H2 ZF
516
532
YRCEECSRHFSWSDHLK
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found