CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_307000043
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_307000043
T139410_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_307000043
C2H2 ZF
15
37
YKCDQCTYSTTKKSGFDKHVKTH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
43
65
YMCEHCGYRTTKKYMLKKHLKTH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
71
93
FKCDTCEYAAATSATLKEHKLRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
99
121
LVCEECGYKTAVKSDLLSHIRRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
127
150
YKCDLCDYCAVQKSDVGKHVMSKH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
156
178
YVCSECGHKMATKTQLTAHMKVH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
184
207
YKCDQCDYCAASKAHLDKHVARRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
222
244
YKCDQCDYSTLLKYSLDRHMKTH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
250
272
YICEQCGYRTTEKNQLMRHQKRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
278
300
YMCEHCGYRTLEKSRLMMHQRTH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
306
328
YKCDQCDYSAANSNTLNEHKLRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
334
356
HVCEECGYKTAVKNDLRSHMRRH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
382
405
YKCDQCEFSSAHRGALKKHVRTKH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
423
445
YICVECGYMTAVRANLSAHKRTH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
451
473
YKCDKCEYSSTRKYCLKQHMNKH
fgenesh2_pg.scaffold_307000043
C2H2 ZF
479
501
YLCGECCYRTDTTANLYRHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found