CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_31000070
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_31000070
T139414_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_31000070
C2H2 ZF
10
32
YRCEECSKQFRELGHLKTHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
38
60
YTCEECNRQFSQLSALKTHTRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
66
88
YRCEECSRQFSTTVHLKIHLRIH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
94
116
YKCEECSRQFSQLSHLKQHMRIH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
122
144
YSCEECCKQFGTARNLNIHFRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
150
172
FTCEECSRQFRTQGHLKSHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
178
200
YSCEECSKQFSQLCALKAHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
206
228
YSCEECSMKFSQLGDLKKHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
234
256
YRCEECSKQFRYLDYLKIHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
262
284
YRCEECGRQFSQLSHLKSHVQTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
290
312
HKCEECNKQFSQLGELKIHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
318
340
YRCEECSRQFSQLSNLKSHMHTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
346
368
YRCEECSRQFSRLEYLKSHMRTH
fgenesh2_pg.scaffold_31000070
C2H2 ZF
374
396
YRCEECSRQFSQLGLLKRHMLTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found