CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_31000075
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_31000075
T139415_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_31000075
C2H2 ZF
10
32
YKCEECSKQFSRPDSLKKHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
38
60
YRCEECSKQFSHLSDLKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
66
88
YRCEECSRQFSQLGDLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
94
116
YRCEQCGKQFSRLDHLKTHKQTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
122
144
YSCEECGKQFCQLANLESHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
150
172
YKCEECSRQFSQLGELKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
178
200
YRCEECSRQFSELCSLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
206
228
YKCEECSKQFSQLGELKSHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
234
256
YGCEECSRQFSRLGHLKRHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
262
284
YNCEKCSREFSEVGSLKKHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
290
312
YRCEECSRQFSRLGHLKRHIGTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
318
340
YRCEECSRQFSRLDHLKEHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
352
374
YSCEECSKQFSQLGHLKTHVQSH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
380
402
YRCEECNKQFSARSNLKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
408
430
YKCEECSKQFTQLVDLKNHVRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
436
458
YRCENCRSQFSVLSNLKRHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
506
528
YRCEECGKQFSRLDNLKTHKQTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
534
556
YRCEKCSKQFSRPGSLRSHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
562
584
YRCEECSKQFSQLYALKIHERTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
590
612
YRCEECSMKFSTRSHLKSHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
618
640
YKCEECSSHFSELGNLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
646
668
YRCEECSRQFSELGNLKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
674
696
YKCEECSKQFNELCHLKKHVRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
702
724
YGCKECGRQFSLQGNLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
730
752
HRCEECSKQFSSHGNLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
758
780
YKCEECSRRFSQMSRLKVHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
786
808
YRCEECSRQFSELAHLTKHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
814
836
YKCEECSRQFSEAGSLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
842
864
YRCEECSKQFSQLSNLKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
870
892
YSCEECSRQFSELGALKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
898
920
YRCEECSRQFSELAHLTKHMRIH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
926
948
YKCEECSRQFSEAGSLKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
954
976
YRCEECSKQFSQLSNLKKHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
982
1004
YSCEECSRQFSELGALKTHMRTH
fgenesh2_pg.scaffold_31000075
C2H2 ZF
1010
1032
YRCEECSKQFRHLNALKKHKKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found