CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_32000104
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_32000104
T139430_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_32000104
C2H2 ZF
75
94
TECGHRAASESNLIKHKRKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
100
122
YKCDQCDYSAAQKGKLDRHRAKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
128
150
LMCGECGYRTADRSYLYVHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
156
178
YKCGQCEYSAASKGDVDRHRAKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
184
206
YMCGECGYRTADRSALKVHMRTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
212
234
YKCNQCDFSAAVKSNLNQHMFTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
314
336
FACTDCGYRTDRKYLLKSHMRKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
342
364
YKCDRCDYSAAWKDNLDLHMSTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
370
392
YMCGECGYRTADRSHLSRHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
401
423
YKCDQCDYSAASKGELDRHMTTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
427
449
FMCGECGYRSADRSVLTKHMRMH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
455
477
YKCDQCDYSAAQRSHLKYHMAQH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
483
505
FKCGECEYRTAMKSHLSEHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
511
533
YKCDQCDYSGASKSNLDQHMAIH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
539
561
YVCGECGFRTAAKSSLKVHMKTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
567
589
YRCDQCDYSAARKRSLDRHMAKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
595
617
YICGECGFMTVASSSLTTHMRTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
623
645
YKCDRCDHSSAKKCNLDVHIRTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
651
673
YVCDECEYRTAVKSHLSEHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
805
827
FECTECSYTTTKKDKFVRHTRTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
833
855
FKCDRCDYSAAEKSTFKYHMAQH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
861
883
YKCGECEYRTAMKSHLSEHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
889
911
YKCDQCDYSGASKSNLDQHMAKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
917
939
YVCGECGFRTAAKSSLTRHMRTH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
973
995
YVCGECGYRTAVRSHLTVHMRKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
1083
1105
FECTECDFTTTKKDTFVIHTRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
1111
1133
YKCDRCDYSAAEKSTFKYHMAQH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
1139
1161
YKCGECEYRTAMKSHLSEHMRRH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
1167
1189
YKCDQCDYSGASKSNLDQHMAKH
fgenesh2_pg.scaffold_32000104
C2H2 ZF
1195
1217
YVCGECGFRTAARSSLTRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found