CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_32000120
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_32000120
T139437_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_32000120
C2H2 ZF
76
98
FVCTECDFRAAKKSELLRHTRKH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
132
154
FRCEDCGYRTAYMSNLTGHVRTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
160
182
YKCDQCDYSAARKGNLDRHMTTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
188
210
YMCGECGHTSADRSALTVHMRRH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
216
238
YKCDMCGYSAAKKCHLESHMAKH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
244
266
FTCVECGYRTAHMSNLSAHMRTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
272
294
YKCDQCDYSTAQKGNLDRHKANH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
300
322
FMCGVCGYRATARSYITIHMRTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
328
350
YQCDQCDYSTARKGNLDRHMANH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
356
378
YMCGECGYRAAEKYSLTVHMRTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
384
406
YKCDLCDFSAATKSGLNKHMATH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
412
434
YMCGECGLRTADRYSLTVHMRSH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
440
462
YICDQCNYSAAKKSDLDSHMARH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
468
490
YMCEECGYRTAHRSNLTAHMRTH
fgenesh2_pg.scaffold_32000120
C2H2 ZF
496
518
YKCDQCDYSATKKSYLTKHLAEH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found