CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_32000122
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_32000122
T139438_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_32000122
C2H2 ZF
75
97
FVCTECGYRAASRSHLLVHARKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
103
125
YKCDQCDYSATQKGNLDQHMAKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
131
153
YKCDECDYAATQKGNLDRHMAKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
159
181
FMCGECGYRTADKSSLTRHMTTH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
187
209
YKCDHCGYSAALKGNLDRHMAKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
215
237
YICGECGYRTAHRSQLSAHMRTH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
243
265
YKCDHCDYSAARKRNLDRHMSKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
271
293
YKCDQCDYSAARKVYLYQHMAKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
297
319
YMCGECGFRTADKSYLTIHLRTH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
325
347
YKCGQCDYSTARKGHLDIHMTKH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
353
375
YVCGECGYRTARKSALSRHMRTH
fgenesh2_pg.scaffold_32000122
C2H2 ZF
381
403
YKCDQCDYSSNDKRCLKKHMVTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found