CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_32000125
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_32000125
T139440_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_32000125
C2H2 ZF
109
131
FVCTECDYRAAKKAELSIHKRKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
137
159
FKCDQCDYAAACKGTLTKHMTKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
165
187
LMCGECGYRTTDVSYLTIHMRKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
193
215
YKCDQCDYSAAQKSNLDQHMVRH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
245
267
FKCRKCGFRTAFKSSLATHMKRH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
273
295
YKCDQCDYSAAEKSSLDRHMTRH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
301
323
YMCGECGFRTSARFSLTVHMRSH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
329
351
YKCDQCNYSAPKKGDLDSHMAKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
357
379
YMCDECGYRTAHKCNLTVHMKTH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
385
407
YKCDQCAYSTGRKPDLKRHKAQH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
413
435
FMCGECGYRTASGSSLTVHLRAH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
441
463
YKCDQCDYSAAKKGNLDRHKAKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
533
555
FVCTECDYRTASKANLLRHTRKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
561
583
YKCDQCDYSAALEGTLDRHMAKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
589
611
YMCGKCVYRTAYKDHLTRHMRTH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
645
667
YKCNVCDYCTAWKRSLDEHMTKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
673
695
HLCQHCGHKTAARSKLSVHMRTH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
701
723
YMCDQCNYSATQKCNLDKHMFTH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
729
751
YMCGECGYRTAYKGDLTVHMRRH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
757
779
FNCDQCTFSAVKKGMLDQHMATH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
785
807
FMCGECGYRTAQRSNLTVHMRSH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
813
835
YKCDQCDYSAAKKSHLDSHMAKH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
841
863
FACGECGYRTAHKSNLTVHMRTH
fgenesh2_pg.scaffold_32000125
C2H2 ZF
869
891
YKCDQCHYSVTDKRHLKKHLDKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found