CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_32000129
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_32000129
T139441_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_32000129
C2H2 ZF
97
119
YKCGQCDYSAAQKCTLDRHLTKH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
125
147
YMCGECGFRTAVRYSLTVHMRSH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
153
175
YKCDQCNYSAAQKGDLNSHKATH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
181
203
YMCGECGYRTAVRSNLTVHLRIH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
209
231
YKCDQCDYSATRKSGLDKHMATH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
237
259
FMCGECGYRTAQRCHLSRHMTTH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
306
328
YKCGQCDYSAAQKCKLDRHMTKH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
334
356
YMCGECGYRTAYKDALTVHMKRH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
362
384
FKCDQCTFSAVAKGELDQHLTKH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
390
412
YMCGECGFRTAARYSLTVHMRSH
fgenesh2_pg.scaffold_32000129
C2H2 ZF
418
440
YKCDQCDYSATKKANLDSHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found