CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000086
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000086
T139445_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000086
C2H2 ZF
46
68
YMCGECGYRAVKRADLYKHMRKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
74
96
YKCDQCDYSAAQKSTLDQHLTKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
102
124
YICGECGYMTAKSSHLTQHMKSH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
130
152
YKCDQCDYSAAHKATLDRHLVKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
158
180
FVCGKCGYRTTQMSNLSRHMRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
186
208
YKCDQCDYSSANKSTLDRHLAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
312
334
FKCDRCDYSAARKSQLDYHIAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
340
362
YRCKRCGFRTMYRYHLTVHMRIH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
368
390
YKCDQCDFAAARKSALVEHQAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
396
418
YMCEECGYRTVHKSYLTVHKKTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
424
446
FKCDQCDYSAVRKCHLDIHLAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
452
474
FICGECGFKTAVMYNLSRHMLSH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
480
502
YKCDQCDYSAVFKTTLNNHKAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
508
530
YMCKECGYKTTQQYYLSRHMRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
536
558
YKCDQCDYSAATKSTLQSHLATH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
564
586
YKCGECGYRTAFKSTLTRHMRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
592
614
YKCDQCDYAAPTKTSFKKHVATH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
620
642
YKCGDCGYRTVTKFDLTKHRRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
648
670
YKCDLCDYSAANKSSLRYHVAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
676
698
YICGECGFRTAKKYNLTKHMRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
704
726
YKCDQCDYSAANKSRLDHHLAVH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
732
754
YMCGECGHRTVTKYDLQKHIRIH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
760
783
YKCDQCDYSATESNHLKTHKLAKH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
789
811
FLCGECGFRSTQRTQLTIHMRTH
fgenesh2_pg.scaffold_34000086
C2H2 ZF
817
840
YKCDQCDYSAASRGNLSKHNLVKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found