CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000141
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000141
T139446_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000141
C2H2 ZF
10
32
FKCDQCDYSAARKSSLEQHKTKH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
38
60
YMCGECEYRTLRKSHFSDHMRTH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
66
89
FKCDQCDYSTILKSYLKRHVSRQH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
95
117
YMCGECGYRAARKDKLSQHMTKH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
123
145
YKCDHCDYSAARKSSLDEHLQIH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
151
173
FMCGECGYRTAKKSRLARHMRTH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
179
201
FKCDQCDYSAALKSHLNEHIARH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
207
229
YMCGECGYRTAKKSRLAIHMRTH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
235
257
YKCDQCEYAAAEKSALTRHLFKH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
263
285
FTCGECGFKTDSNSHLSRHMRTH
fgenesh2_pg.scaffold_34000141
C2H2 ZF
291
313
YKCDQCDYSAAQKSGLDGHKRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found