CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000150
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000150
T139447_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000150
C2H2 ZF
85
107
YMCGECGYRAAQKHHLSRHMRTH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
113
136
FKCDQCDFSAAQKSTLDNHTVAKH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
142
164
HMCGECGYRTANKTHLSRHMRTH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
170
192
YKCDQCDYSATVKHHLIDHQIRH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
198
220
YMCEVCGYRTAQKFNLSRHMRIH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
226
248
YKCDQCNYSASERSKLDKHLPKH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
254
275
YKCDECGYKTAKKANFSRHMRT
fgenesh2_pg.scaffold_34000150
C2H2 ZF
295
317
YLCGECGYRTAKKDHLTEHLKIH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
323
345
FMCGECGYRSAHKCHLSEHMKTH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
351
374
FKCDQCDYSAAQKTHMDRHIVAKH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
380
402
YICGECGYRTTQKAHLSQHMRIH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
408
430
YKCNQCDYTVAHKSSLNDHMLKH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
436
458
YKCGECGYRTAKKANLFRHMRTH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
464
486
YKCDQCDYSAAQKCALAQHMRKH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
492
514
YMCGVCGYRAAKMSNVSDHMRAH
fgenesh2_pg.scaffold_34000150
C2H2 ZF
520
542
YKCDMCNYSAARKSQLFGHLKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found