CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000160
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000160
T139453_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000160
C2H2 ZF
170
192
YMCGECGYRAAKKSHLSQHMTIH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
198
220
YKCDQCDYSAARKSHLERHVAKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
228
250
YMCGECGYRATQMSDLSKHMRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
256
278
YKCDQCNYSAASKFSFNRHVRKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
364
386
YMCWDCGYRTDRKYHLSRHMRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
392
414
FKCDHCDFSAAQKSTLDDHLTKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
420
442
YMCGECGYRTAQRSNLSRHMRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
448
470
YKCNQCDYSYADKSALNYHLGKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
476
498
YICGECGYRATRKNDLSRHMRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
504
526
YKCDQCDYSAARKINLVQHMTKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
532
554
YRCDQCDYYAVQKYRLVDHLRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
560
582
FMCGKCGYRASQKSHSSKHMRTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
588
610
YKCDQCDFSAIDKFKLKQHQVKH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
616
638
YKCGECAYMTAYRSHLSRHMKTH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
644
666
YKCDQCDYSSALKHHLIDHQTRH
fgenesh2_pg.scaffold_34000160
C2H2 ZF
672
694
YMCGECGYRAAQRATLSRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found