CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_34000167
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000167
T139457_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000167
C2H2 ZF
182
204
YMCVECGYRAAYKSQISQHMRTH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
210
231
YKCDQCDYSAAQKGGLNKHLAK
fgenesh2_pg.scaffold_34000167
C2H2 ZF
233
255
YMCGECGYRTATKSRFSRHMKIH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
261
284
FTCDQCDYSTSLKSNLNRHIGEKH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
290
312
YMCGECGHRTAQKSSLSKHMRIH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
318
340
YRCDQCGYSAAEKSNLVTHIKKH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
346
368
FICGACGYRTAHKSDLSRHMRTH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
374
396
YMCDQCDYSATEKSHLDRHLRKH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
402
424
YMCGECGYRTTQRGHLSRHMRTH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
430
452
YKCDQCDYSAAHKSDLDQHLSKH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
458
480
YMCGECGYRAARKQHLSLHMRTH
fgenesh2_pg.scaffold_34000167
C2H2 ZF
486
508
YKCDQCDYSTAQKGMLDQHLMEH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found