CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_34000168
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000168
T139458_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000168
C2H2 ZF
10
32
YKCDQCDYSAAQKSALHRHLAKH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
38
60
YVCDVCGYKTPYRPTLFQHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
66
88
YKCDHCDFSSARKDDLKKHVANH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
94
116
FMCVECGYRAYSRSILSAHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
122
144
YKCDQCDYSAADKSTLVKHIRKH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
150
172
YMCGECGFRTAGRSTLSRHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
178
200
YKCDQCDYCAARKYDLDKHLATH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
206
228
FMCGECGYRTARKSTLYKHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
234
256
FTCDRCDYSAAQKCTLDRHLMTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
262
284
YMCGECGHRTAEKSDLARHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
385
407
YKCDQCDYSAAQKSALHAHLAKH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
413
435
YVCDVCGYKTPYRPTLSQHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
441
463
YKCDHCDFSSARKDDLKKHVANH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
469
491
FLCVECGYRAYTRSILSAHMRKH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
497
519
YKCDQCDYSAADKSTLVKHIRKH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
525
547
YMCGECGFRTAGRSTLSRHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
553
575
YKCDQCDYCAARKDDLDKHLATH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
581
603
FMCGECGYSTARKSTLYRHMRTH
fgenesh2_pg.scaffold_34000168
C2H2 ZF
609
631
YKCDQCDYSAAQKSALDFHLRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found