CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000171
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000171
T139461_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000171
C2H2 ZF
63
85
YMCGECGYRTAVNANLSRHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
91
113
YKCDQCDYSAAQKSTLDNHLVKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
119
141
YMCGECGFRTTRKSHLSAHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
147
169
YKCDKCDYSAAQKGNLNKHLAKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
175
197
YMCGECGYRTARKFDLSQHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
203
225
YKCDQCNYSSSRKSHLEQHVAKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
413
435
YMCEECGFRTSRKFNLSAHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
441
463
YKCDQCDYSAAQKSDLNKHLAKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
469
491
YICGECGHRTARKSYLSQHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
497
519
YKCDQCDYCAADKSTLVRHIRKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
525
547
YMCGECGYRAAQKSHLSAHMRIH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
553
575
YKCDQCDYSAAQKSDLNKHLAKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
581
603
YICGECGHRAARKSYLSQHMRTH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
609
631
YKCDQCDYCAADKSTLVRHIRKH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
637
659
YMCGECGYRAAQKSHLSAHMRIH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
665
687
YKCDQCDYSAAQKGTLDDHVANH
fgenesh2_pg.scaffold_34000171
C2H2 ZF
693
715
FMCGECGYRTSRRPYLTRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found