CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000181
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000181
T139466_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000181
C2H2 ZF
104
126
YMCGECGYKAPEMTSLFLHMRTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
132
155
FNCDKCDYSASLESNLNRHISEKH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
264
286
YMCGECGFRTAQKANLSKHMRTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
292
315
YKCDMCDYSAIQKVHLKQHTAAKH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
321
344
FKCDQCDYSAAQKARLTKHIAVKH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
396
418
YICGQCGYKATNKGNIAKHVRTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
424
447
YKCDQCDYSATQKSHLNRHMATKH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
453
476
YMCGECGYRTAVKHLLAQHMLRTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
482
505
LKCDQCDYSTAQKYLLKRHIATTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
511
533
FKCEDCGYKTAYKCALFLHMRTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
539
561
YKCDQCDYSAGRKSHLDNHLASH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
567
589
YICEQCGYRTTEKYRLSQHMKTH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
595
617
YKCDQCDYSAAEKSNLKRHLVKH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
623
645
YMCGECGYRAAEKNNLTKHLRRH
fgenesh2_pg.scaffold_34000181
C2H2 ZF
681
704
YRCDQCDYSAALKGTLERHVAKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found