CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000184
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000184
T139468_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000184
C2H2 ZF
93
115
YICEECGYRADCKAHLFRHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
121
143
YKCDQCDYSAALKSNLVNHIRKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
149
171
CMCGECGYRTILKSDLSRHLVTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
177
199
YKCDQCDYSAARKHNLDSHITQH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
205
227
YTCGECGYRTAQRCKLSLHMKTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
233
256
YKCDQCDYSAAQKSNLDKHLSKTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
268
290
YLCGECGYRTAQRCNLSLHMKTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
296
318
YKCDQCDYSAAQKSNLDQHQAKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
324
346
YMCGECGYRAARKSKLLVHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
352
374
YKCEQCGYSAAQKSNLDEHVAKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
380
402
YICGECGYRAIRKSKLVVHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
408
430
YKCDQCEYSATQKCTLDRHRLKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
790
813
HKCDQCNYSTSRASYLVQHLTNHH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
818
840
YMCGECGHRTAYKSGLSSHMKTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
846
868
YKCDQCDYSAARKSTLNRHQAKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
891
913
YKCDHCDYSAHREWHLLQHLRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
919
941
YMCGECGFRTSYKSCLSQHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
947
970
HKCDQCDYSAGQRGHLLRHIASKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1056
1078
YMCGECGYRTIYRSHLSRHMKTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1084
1106
YKCDQCDYSAAQKGDLDKHLVKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1112
1134
FICGECGYRSARKSNVSTHMITH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1140
1162
YKCDQCGYRTAWKSHLSQHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1168
1190
YKCDQCDYSAAQKSTFDQHVIKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1196
1218
YMCEMCGYRTAKKSHLTEHVRIH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1224
1246
YKCHQCDYSTAHKANLEKHVAKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1252
1274
YMCGECGYRTTHQCHLSRHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1280
1302
YNCDQCDYSAAQKGDLDKHLAKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1308
1330
YMCGECGYRAAQRCNLSRHMKIH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1336
1357
YKCDQCDYSVAQKSTLNKHNKM
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1436
1458
FMCGECGYRASQKSHLSKHMRTH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1464
1486
YKCDQCDFSAIDKFKLKQHQEKH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1492
1514
YKCGECAYMTAYRSHLSRHMRSH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1520
1542
YKCDQCDYSAAEKHHLIDHQTRH
fgenesh2_pg.scaffold_34000184
C2H2 ZF
1548
1570
YMCGECGYRAAQRSTLSRHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found