CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000189
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000189
T139471_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000189
C2H2 ZF
43
65
FVCGECGYRAAYRSHISQHMRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
71
94
YKCHHCDYAAAQQANLAYHIATKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
100
122
YMCGECGYRATKMFDLARHMRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
128
151
YKCDQCDYSAAQVANLDQHIAAKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
156
178
YMCGECGYRTAYKSYLSQHMRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
184
206
YKCDQCDYSAAQKSAFHRHLAKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
212
234
HVCDVCGYKTPNKSGLSRHMRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
240
262
YKCDHCHYSAARKDDLKKHVANH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
268
290
FLCVECGYRACRRSILSVHMRKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
296
318
YKCEQCDYSAAQKRYLDRHLMKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
324
346
FMCDECGFRTPCKSTLTRHMRSH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
352
374
YKCDQCDYSAAQKSDLDIHLARH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
380
402
YMCAECGYRTARKSNLYKHMRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
408
430
YKCDQCDFSAAQKSNLDFHLRKH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
436
458
YKCDQCDYSAAHKRTLDRHLMTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
464
486
YMCGVCGHRTARKSDLFRHIRTH
fgenesh2_pg.scaffold_34000189
C2H2 ZF
492
514
YKCDQCEYSSAEKSTLNRHLTKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found