CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000198
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000198
T139478_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000198
C2H2 ZF
73
95
YMCGECGYRTSQRSKLSRYMRTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
101
123
YKCDHCDYSAVQKSSLDHHLAKH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
129
151
YMCGQCVYSTARKNDLSVHIRIH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
157
179
YKCDQCSYSAAVKSTLDQHLTTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
185
207
YMCGECGFRAAQKSNLSRHMRTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
213
235
YKCDQCEYSAVKKHHLIGHQKTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
241
263
YMCGECGYRTADRSTLSRHMKIH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
269
291
YMCGECGYRAAYKYNLSQHMRTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
297
319
YKCDQCNYSAAQKSSLDQHLMKH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
325
347
YMCGECGHRTTTKSDLSRHMRIH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
353
376
YKCDQCDYSAAQKVNFDAHIAAKH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
382
404
YMCGECGYRTAGRSTLSRHMRTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
410
432
YKCDQCDYSAMQKGDLDKHLATH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
438
460
YMCGECGYRTARKSNLSRHMRTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
466
488
FKCNQCDYSAAQKCTLDRHVMTH
fgenesh2_pg.scaffold_34000198
C2H2 ZF
494
516
FMCGECGYGTADRSKLSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found