CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_34000204
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000204
T139482_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000204
C2H2 ZF
613
634
YKCDQCDYAAAQKGNLDQHIAA
fgenesh2_pg.scaffold_34000204
C2H2 ZF
641
663
YICWECGYSTACKSHLSQHMRTH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
669
691
YKCDQCDYSAAQKSALHAHLAKH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
697
719
YVCDVCGYRAPNKYCLSRHMRTH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
725
747
YKCDHCDFSSARKDDLRKHVANH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
753
775
FMCVECGYRAYTRSDLSAHMRNH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
781
803
YKCEQCDYSAAQKGNLDRHLMKH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
809
831
FMCDECGFRTPCKSTLIRHMRSH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
837
859
YKCDQCDYSAVQKGDLDNHLATH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
865
887
FMCGECGHRTARKSNLSRHMRTH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
893
915
FKCDQCDYCAARKCTLDRHIMTH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
921
943
YMCGECGFRTADTSDLSRHKWTH
fgenesh2_pg.scaffold_34000204
C2H2 ZF
949
971
YKCHLCNYSAAIKARLSKHLTRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found