CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000210
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000210
T139488_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000210
C2H2 ZF
172
194
FMCGECGYRAAYRSHMSQHMRTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
200
223
YKCHHCDYAAAQQGSLAYHIATKH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
229
251
YMCEECGYRATKMFDLSRHMRTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
257
280
YKCDQCDYSAAQKGNLDQHIAAKH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
299
321
FMCVECGYRAYSRSILSAHMRTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
327
349
YKCDQCDYSAADKSTLVKHIRKH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
355
377
YMCGECGFRTAYRSTLSRHMRTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
383
405
YKCDQCDYCAARKYDLDKHLATH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
411
433
FMCGECGYRTARKSTLYKHMRTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
439
461
FTCDRCDYSAAQKCTLDRHLMTH
fgenesh2_pg.scaffold_34000210
C2H2 ZF
467
489
YMCGECGHRTAEKSDLARHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found