CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000211
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000211
T139489_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000211
C2H2 ZF
194
216
YMCGVCGYRAAQKSHLSAHMRTH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
222
244
YKCYQCDYSAAQKGTLDDHVANH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
371
393
FKCDQCNYSASRKSHLEQHVAKH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
399
421
YMCGECGYRATEKSDLSVHMRTH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
427
449
YKCDRCDYSAAQKGHLNQHLMKH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
455
477
YMCGKCGYRTAQKQHLSQHLRTH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
483
505
YKCDKCDYSAAQKSTLDQHVIKH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
511
533
YMCGSCGYRTAKKSHLTEHVRIH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
539
561
YKCDRCDYSAATKTALKQHVAIH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
567
589
YLCGECGYRTAQKSHLSKHMRKH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
595
617
YKCDQCDYAAAQKGTLDQHLMKH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
623
645
YMCGECGYRTAQRTNLSQHLRTH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
651
673
YKCDQCDYSAAQKQHLIDHQTRH
fgenesh2_pg.scaffold_34000211
C2H2 ZF
679
701
YMCEKCGYRAAQRSTLSQHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found