CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000213
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000213
T139491_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000213
C2H2 ZF
84
106
YMCGECGYRTSQRSKLSRHMITH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
112
134
YKCDHCDYSAVQKSSLDHHLAKH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
140
162
YMCGECGYSTARKNDLSVHIRIH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
168
190
YKCDQCDYSAAVKSTLDQHLTTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
196
218
YMCGECGFRAAQKSNLSRHMRTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
224
246
YKCDQCEYSAVEKHHLIGHQKTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
252
274
FMCGECGYRTADRSTLSRHMKIH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
280
302
YMCGECGYRAAYKYNLSKHMRTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
308
330
YKCDQCNYSAAQKSTLDQHLMKH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
336
358
YMCGECGHRTTTKSDLSRHMRIH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
364
387
YKCDQCDYSAAQKVNFDAHIAAKH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
393
415
FMCGECGYRTADRSTLSRHMRTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
421
443
YKCDQCDYSAVQKGDLDKHLATH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
449
471
FMCGECGHRTARKSNLSRHMRTH
fgenesh2_pg.scaffold_34000213
C2H2 ZF
477
499
FKCNQCDYSAAQKCTLDRHIMTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found