CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000214
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000214
T139492_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000214
C2H2 ZF
84
106
YMCGECGYRTEKKSNLSQHIRTH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
112
134
YKCDQCDYSAARKSSLDKHLQIH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
140
162
YMCGECGYRTAQKSDLSRHMRTH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
168
190
YKCDQCDYSAAQKPNLDRHLRKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
196
218
YMCGECGYRTNYKVSLSGHMRTH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
224
246
YKCDQCDYSAAVQSTLDKHLAKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
252
274
YMCGECGYRVTQKSDLSKHMRIH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
280
302
YKCGQCDYSAAQKGHLDQHLIKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
309
331
YMCGECGYRTAWKSHLFQHMRTH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
337
359
YKCDQCDYSAAQKGLLDQHRMKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
365
387
YMCGECGYRATQKSDLVKHMRIH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
393
415
YKCDQCDYSAAQKSHMQQHVLKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
441
463
YMCGECGLRTAIKCNLSVHMRSH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
469
491
YKCDQCDYSAAHRSTLDQHLEKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
497
519
FMCGECGYRAAQWQHLYRHMRTH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
525
547
YKCDQCDYSAAQKLTLDKHLVKH
fgenesh2_pg.scaffold_34000214
C2H2 ZF
553
574
YMCGECGFRTAQRSNLSRHMRT
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found