CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000215
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000215
T139493_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000215
C2H2 ZF
150
172
YICGECGYRTARKSDLSQHMRIH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
178
200
HKCDQCEYSAARKSHLKRHVAKH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
208
230
FMCGECGYRATQKSDLSKHMRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
236
258
YKCDQCDYSAAQKGHLDQHLMKH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
264
286
YMCGECGHRTAQKSDLTRHMRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
292
314
YKCDQCDYSAAEKHSLIDHQTRH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
320
342
YMCGECGYRAAQRSTLFQHRRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
348
370
YKCDQCDYSAAERSKLGRHKRKH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
376
398
YMCGECGYRTAQKSHLSEHMRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
404
426
YKCDQCGYSAARKYKLAEHLRIH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
432
454
FICEECGYRAARKSDLSRHMRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
460
482
YKCDQCDYSASQKHHLIDHQTRH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
488
510
FMCGECGYRAAQRSALSQHMRTH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
517
538
KCDQCDFSAIQKYDLVKHIRKH
fgenesh2_pg.scaffold_34000215
C2H2 ZF
544
566
YMCGECGYRTTNKSSLSIHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found