CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000218
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000218
T139496_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000218
C2H2 ZF
84
106
YMCGVCGYRTERKSNLSLHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
113
134
KCDQCDYSAARKSSLDKHLQMH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
140
162
YMCGDCGYRTAQKSDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
168
190
YHCDQCDYSAAQKPHLDRHLRKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
196
218
YMCGECGYRTTQKYDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
224
246
YKCDQCSYSAAQKYYLDKHLVKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
252
274
YMCGECGYRTTQKYDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
280
302
YKCDQCSYSAAQKYYLDKHLVKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
344
366
YMCGECGYRTADRSALSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
372
394
HKCDQCDYSAALKHYLIDHQRRH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
400
422
YMCGECGYRAAKKSTLSQHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
595
617
YMCGECGYRTAKKSHLSRHTRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
623
645
CKCDQCDYSAAHKSSLEQHVAKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
651
673
YKCDQCDYSAARKSTFDKHLVKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
679
701
YMCGECGFRTAHQCYLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
707
729
YKCDQCNYSAAHKCDLDKHLVKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
735
757
YMCGECGYRSSRKNDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
763
785
YKCDQCDYSAADRTTLANHQRKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
791
813
YMCGECGFRTNRKFILSVHMRKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
819
841
YKCDQCDYSAAQKSNLEQHLSKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
847
869
YMCGECGYRTAYRSDLSKHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
876
897
YKCDQCDYSASQKSTLDRHGKT
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1047
1069
FMCGECGYRTVQMSDLTKHMRIH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1105
1127
YICAECGYRATHKCTLAYHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1133
1156
YNCDHCDFSTSHKSNLDRHIAAKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1162
1184
YMCGECGYRTAYRSDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1190
1212
YKCDQCDYSAARRSALEEHKAKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1218
1240
FMCGECGYRAARKSHLSQHMRSH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1246
1268
YRCDHCDYSAADKSALDHHIVIH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1274
1296
YMCGECGFRTTQKSHLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1302
1324
YRCDQCDYSAADKYTLDQHQRKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1330
1352
YICDECGYRAAGRSTLSRHMKTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1358
1380
YLCDQCDYSTAHKQYLIDHQSRH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1533
1555
YMCGECGYRSVQKSDLTKHMRIH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1561
1583
YKCDQCDYSAAQKSRLNKHLTKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1589
1611
YMCGECGVRTPYKASLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1617
1640
YKCDQCDYSAARKSTLDNHTIAKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1646
1668
YMCGECGYRTVERSTLSRHRRIH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1674
1696
YKCDQCDYSATEKSTLVKHIRKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1702
1724
YICGECGYRVTRKNDLSRHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1730
1752
YKCDQCDYSAARKINLVQHLTKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1758
1780
YRCDQCDYYATQKYRLVDHLRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1786
1808
FMCGECGYRASQKSHLSKHMRTH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1814
1836
YKCDQCDFSAIDKFKLKQHQEKH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1842
1864
YKCGECAYMTAYRSHLSRHMRYH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1870
1892
YKCDQCDYSAAEKHHLIDHQTRH
fgenesh2_pg.scaffold_34000218
C2H2 ZF
1898
1920
YMCGECGYRAAQRATLYRHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found