CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000221
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000221
T139499_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000221
C2H2 ZF
179
201
YMCGECGYRTAYKSGLSRHMRTH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
207
229
YKCDQCDYSAAHKSTLDEHLTKH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
235
257
YMCGECGFRTTYKESLSRHMRTH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
263
285
YKCDQCDYSASEKGHLNQHLMKH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
291
313
YMCGECGYRAARKSHLSKHIRIH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
319
341
YKCDQCDYSAAQKSQLNKHQVKH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
347
369
YMCGECGYRTAYKSDLSKHMRIH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
375
397
YKCDQCDYSAALKSTLAQHQVTH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
431
453
YRCDQCDYSAAKKFDLDKHVRKH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
459
481
YMCGECGYRAAQRSTLSRHMRTH
fgenesh2_pg.scaffold_34000221
C2H2 ZF
487
509
YKCDQCDYSTTQKQHLINHQSRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found