CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000222
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000222
T139500_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000222
C2H2 ZF
358
380
YMCGQCEFTTADKAGLSQHMETH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
384
406
YRCDQCDYSAVREAELSIHLAKH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
412
435
YKCDHCDYAAAQKPHFDYHMAAKH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
441
463
YMCGECGYRTVYRSSLSRHMRTH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
469
491
YKCDQCDYSAAEKSKLSDHVRTH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
497
519
YKCDQCDYSATQKSNLDRHLVTH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
525
547
YMCGECGYRTAQKSDFSKHMRTH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
553
575
YKCDQCDYSAARKSHLDNHLAKH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
581
603
YMCGECGYRTARKHHLSRHMRTH
fgenesh2_pg.scaffold_34000222
C2H2 ZF
609
632
YKCDQCNYSATKKSHLTLHLTRRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found