CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000224
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000224
T139502_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000224
C2H2 ZF
120
142
FMCGECGYRTARKSTLYKHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
148
170
FTCDRCDYSAAQKCTLDRHLMTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
354
376
YKCGECEHRAAQKSDLSRHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
382
404
YKCDQCDYSAAQKFDLSKHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
410
432
YKCDQCDYSAARKSSLDQHLANH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
438
460
FMCGECGYRSAQKSNLSTHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
466
488
YKCDQCGYRTAWKSHLSQHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
494
516
YKCDQCDYSAAQKSTLDQHVIKH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
522
544
YMCKMCGYRTAKKSHLSRHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
550
572
FKCDQCDYSAAHKSTLDEHVTTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
578
600
YMCGECGFRATRKSELSRHMRTH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
606
628
YKCDQCDYSAARKCTLDEHLTIH
fgenesh2_pg.scaffold_34000224
C2H2 ZF
635
656
MCGECGYRTTRKSNFSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found