CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_34000225
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000225
T139503_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000225
C2H2 ZF
184
206
YMCVECGYRTDKKSHLSRHMRIH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
212
234
YKCDQCDYSAADKSTLEQHVAKH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
240
262
YMCGDCGYRTAYRSHLSRHIRIH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
268
290
YKCDQCGYSAAHKSTLEQHVAKH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
296
318
YICGVCGHRANQKSDLSRHIRTH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
324
346
YKCDQCDYSAAQKSTLEEHQAKH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
352
374
YMCGECGYRTAKRSTLSRHIRTH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
380
402
YKCGQCDYSAARRQYLIDHQTRH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
436
458
YKCNQCDYSAAKKYKLAEHLTIH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
464
486
FICEECGYRAARKPVLSRHMRTH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
492
514
YKCDECDYSASHKHHLIDHQRRH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
520
542
YICGECGYRAAKKSTLSQHMRTH
fgenesh2_pg.scaffold_34000225
C2H2 ZF
547
569
YKCGQCDYSAAHRTSFNRHLRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found